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	<title>Brainwaving &#187; nature</title>
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		<title>Do You Want to Live Forever?</title>
		<link>http://www.brainwaving.com/2011/03/29/do-you-want-to-live-forever/</link>
		<comments>http://www.brainwaving.com/2011/03/29/do-you-want-to-live-forever/#comments</comments>
		<pubDate>Tue, 29 Mar 2011 08:43:45 +0000</pubDate>
		<dc:creator>Brainwaving Admin</dc:creator>
				<category><![CDATA[Big Ideas]]></category>
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		<guid isPermaLink="false">http://www.brainwaving.com/?p=1528</guid>
		<description><![CDATA[This show is all about the radical ideas of a Cambridge biomedical gerontologist called Aubrey de Grey who believes that, within the next 20-30 years, we could extend life indefinitely by addressing seven major factors in the aging process. He describes his work as Strategies for Engineered Negligible Senescence (SENS).]]></description>
			<content:encoded><![CDATA[<p>This show is all about the radical ideas of a Cambridge biomedical gerontologist called Aubrey de Grey who believes that, within the next 20-30 years, we could extend life indefinitely by addressing seven major factors in the aging process. He describes his work as Strategies for Engineered Negligible Senescence (SENS).</p>
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		<title>The neurons that shaped civilization</title>
		<link>http://www.brainwaving.com/2011/02/14/the-neurons-that-shaped-civilization/</link>
		<comments>http://www.brainwaving.com/2011/02/14/the-neurons-that-shaped-civilization/#comments</comments>
		<pubDate>Mon, 14 Feb 2011 09:44:56 +0000</pubDate>
		<dc:creator>Brainwaving Admin</dc:creator>
				<category><![CDATA[Science of the Mind]]></category>
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		<guid isPermaLink="false">http://www.brainwaving.com/?p=1512</guid>
		<description><![CDATA[Neuroscientist Vilayanur Ramachandran outlines the fascinating functions of mirror neurons. Only recently discovered, these neurons allow us to learn complex social behaviors, some of which formed the foundations of human civilization as we know it.]]></description>
			<content:encoded><![CDATA[<p>Neuroscientist Vilayanur Ramachandran outlines the fascinating functions  of mirror neurons. Only recently discovered, these neurons allow us to  learn complex social behaviors, some of which formed the foundations of  human civilization as we know it.</p>
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		<title>Deers of Perception</title>
		<link>http://www.brainwaving.com/2011/01/28/deers-of-perception/</link>
		<comments>http://www.brainwaving.com/2011/01/28/deers-of-perception/#comments</comments>
		<pubDate>Fri, 28 Jan 2011 13:20:15 +0000</pubDate>
		<dc:creator>Charlotte Walsh</dc:creator>
				<category><![CDATA[Health & Happiness]]></category>
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		<guid isPermaLink="false">http://www.brainwaving.com/?p=1497</guid>
		<description><![CDATA[These reindeer have been fed a mushroom that makes their urine hallucinogenic. Or have they? Sam Williams visits Carsten Höller&#8217;s new &#8216;scientific experiment&#8217; What could be more festive than spending a night locked in an art gallery with a dozen reindeer and a fridge full of psychedelic drugs?Soma, Carsten Höller&#8216;s current installation in a former railway [...]]]></description>
			<content:encoded><![CDATA[<p>These reindeer have been fed a mushroom that makes their urine hallucinogenic. Or have they? Sam Williams visits Carsten Höller&#8217;s new &#8216;scientific experiment&#8217;</p>
<p>What could be more festive than spending a night locked in an art gallery with a dozen reindeer and a fridge full of psychedelic drugs?<a title="Soma" href="http://www.somainberlin.org/exhibition/concept.html?L=1">Soma</a>, <a title="More from guardian.co.uk on Carsten Höller" href="http://www.guardian.co.uk/artanddesign/carsten-holler">Carsten Höller</a>&#8216;s current installation in a former railway station in Berlin, purports to be offering exactly that. A pen running the length of the <a title="Hamburger Bahnhof" href="http://www.hamburgerbahnhof.de/text.php">Hamburger Bahnhof</a>, now the city&#8217;s contemparary art museum, contains 12 reindeer, 24 canaries, eight mice and two flies. Giant toadstool sculptures are planted on a mushroom clock that the reindeer can turn with their antlers, and at the centre is a mushroom-shaped &#8220;floating hotel&#8221; – a bed on a platform complete with minibar, yours for €1,000 a night. (There&#8217;s also a <a title="raffle" href="http://www.somainberlin.org/lottery-drawing.html?L=1">raffle</a> giving away free places.)</p>
<p>The twist is that this is meant to be a scientific experiment, in which half the reindeer have been fed &#8220;fly agaric&#8221; mushrooms, which they consume naturally in the wilds of Siberia. It makes their urine hallucinogenic (some people believe that this is the origin of the story of Santa Claus&#8217;s sleigh being pulled by flying, red-nosed reindeers).</p>
<p>The urine is collected by handlers and stored in fridges by the walls, which also hold both dried and fresh fly agaric mushrooms. By day they&#8217;re locked, but at night the fridges are opened, allowing people staying over to sample the contents. However, because only half the reindeer are fed the mushrooms, it&#8217;s impossible to know which bottles, if any, contain hallucinogenic urine.</p>
<p>Tanja Klein, 28, won a competition to spend the night in the museum with her boyfriend, Sachar Kriwoj, 30. &#8220;I wasn&#8217;t going to go and drink six bottles of reindeer urine to find out,&#8221; says Klein. &#8220;I&#8217;m not into drugs, I&#8217;m into art.&#8221;</p>
<p>Höller hasn&#8217;t tried the urine, but he has tried the mushrooms. &#8220;They&#8217;re very unpleasant,&#8221; he says, speaking from his home in Stockholm. &#8220;And you throw up. The first four times I tried it, I became comatose. Then you wake up, throw up, and you don&#8217;t know where you are, or how long you&#8217;ve been asleep. The sixth time, I started to chant like a Tibetan monk.&#8221;</p>
<p>The title Soma comes from the name of the sacred libation drunk by the Indo-Persian followers of the Vedic religion, Hinduism&#8217;s 5,000-year-old parent. Its ancient text, the Rigveda, contains 114 hymns to &#8220;creative juice&#8221;, supposed to offer immortality. The recipe was lost, but in the 1960s researcher <a title="Robert Wasson" href="http://www.imaginaria.org/wasson/life.htm">Robert Wasson</a> hypo-thesised that soma was based on the fly agaric mushroom.</p>
<p>Höller&#8217;s installation sets out to test this hypothesis – and the possibility that art may change perceptions even more effectively than drugs. It takes the form of an experiment set in a playground: from that giant &#8220;double mushroom clock&#8221; the reindeer move with their antlers, to the &#8220;mice square&#8221;, based on an actual playground in Paris designed by sculptor <a title="Pierre Szekely" href="http://www.szuv.hu/pierreszekely/eletrajz_e.html">Pierre Székely</a>.</p>
<p>One side of the hall is the &#8220;test&#8221;, the other the &#8220;control&#8221;. Reindeer on the test side are fed the mushrooms. (&#8220;At least in principle,&#8221; says Höller, helpfully.) On each side, the reindeer urine is spread on the food of the other animals. From observation posts, visitors watch the behaviour of the canaries, mice and houseflies for signs of intoxication and form their own conclusions. &#8220;The experiment is completed in the minds of the visitors,&#8221; says Höller. &#8220;It&#8217;s very unscientific.&#8221; In other words, it&#8217;s an open question whether the reindeer are even fed the mushrooms at all: the power of suggestion makes you likely to observe something that may not take place.</p>
<p>Experimentation has been a part of Höller&#8217;s work since he began his career as an artist while still an agricultural research scientist in the early 1990s. He went on to install 2006&#8242;s <a title="Test Site" href="http://arts.guardian.co.uk/flash/page/0,,1891219,00.html">Test Site</a>, in Tate Modern&#8217;s Turbine Hall, which allowed gallery-goers to throw themselves down double-helix slides.</p>
<p>Overnight visitors to Soma have reported some strange events. Florian Wojnar, a friend of Höller&#8217;s, spent the night in the museum with his 11-year-old son. &#8220;He was really excited, because at some point, there were seven reindeer on one side and five on the other. In the morning, we counted again and there were six on each. I never saw them move.&#8221;</p>
<p>Dorothée Brill, the museum&#8217;s lead curator, says: &#8220;As far as we can tell, nobody&#8217;s done anything they shouldn&#8217;t have.&#8221; Staff at the restaurant, however, report that some guests &#8220;drink the minibar dry&#8221;.</p>
<p>It&#8217;s hard to resist the suspicion that the exhibition is intended as a microcosm of society, an allegory for democracy, with extra privileges and more fun for those able to pay. And, if this is an experiment, make no mistake: it&#8217;s you in the lab. Meanwhile, those tempted to make a Christmas visit should bear in mind that the Hamburger Bahnhof is closed on Christmas Eve. &#8220;The reindeer have somewhere else to be that day,&#8221; the museum explained.</p>
<p>• Soma is at the Hamburger Bahnhof, Berlin, until 6 February. Details:<a href="http://somainberlin.org/">somainberlin.org</a></p>
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		<title>Time tangled up in Quantum&#8230;</title>
		<link>http://www.brainwaving.com/2011/01/25/time-tangled-up-in-quantum/</link>
		<comments>http://www.brainwaving.com/2011/01/25/time-tangled-up-in-quantum/#comments</comments>
		<pubDate>Tue, 25 Jan 2011 10:58:27 +0000</pubDate>
		<dc:creator>David Luke</dc:creator>
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		<guid isPermaLink="false">http://www.brainwaving.com/?p=1493</guid>
		<description><![CDATA[Why is it that psychologists still abhor parapsychology with all this stuff going on in physics? Dr. David Luke x Physicists describe method to observe timelike entanglement January 24, 2011 by Lisa Zyga (PhysOrg.com) &#8211; &#60; More information: S. Jay Olson and Timothy C. Ralph. &#8220;Extraction of timelike entanglement from the quantum vacuum.&#8221; arXiv:1101.2565v1 [quant-ph]&#62; [...]]]></description>
			<content:encoded><![CDATA[<div>Why is it that psychologists still abhor parapsychology with all this stuff going on in physics?</p>
<p>Dr. David Luke x<br />
<strong><br />
Physicists describe method to observe timelike entanglement</strong></p>
<p>January 24, 2011 by Lisa Zyga (PhysOrg.com) &#8211;</p>
<p>&lt; More information: S. Jay Olson and Timothy C. Ralph. &#8220;Extraction of timelike entanglement from the quantum vacuum.&#8221; arXiv:1101.2565v1 [quant-ph]&gt;</p>
<p>In &#8220;ordinary&#8221; quantum entanglement, two particles possess properties that are inherently linked with each other, even though the particles may be spatially separated by a large distance. Now, physicists S. Jay Olson and Timothy C. Ralph from the University of Queensland have shown that it&#8217;s possible to create entanglement between regions of spacetime that are separated in time but not in space, and then to convert the timelike entanglement into normal spacelike entanglement. They also discuss the possibility of using this timelike entanglement from the quantum vacuum for a process they call &#8220;teleportation in time.&#8221;</p>
<p>&#8220;To me, the exciting aspect of this result (that entanglement exists between the future and past) is that it is quite a general property of nature and opens the door to new creativity, since we know that entanglement can be viewed as a resource for quantum technology,&#8221; Olson told PhysOrg.com. &#8220;The greatest significance of our result is almost certainly in some application that is yet to be imagined.&#8221;</p>
<p>Olson and Ralph&#8217;s paper, which is posted at arXiv.org, describes how timelike entanglement can be converted into spacelike entanglement using two detectors.</p>
<p>&#8220;Essentially, a detector in the past is able to `capture&#8217; some information on the state of the quantum field in the past, and carry it forward in time to the future &#8212; this is information that would ordinarily escape to a distant region of spacetime at the speed of light,&#8221; Olson said. &#8220;When another detector then captures information on the state of the field in the future at the same spatial location, the two detectors can then be compared side-by-side to see if their state has become entangled in the usual sense that people are familiar with &#8212; and we find that indeed they should be entangled. This process thus takes a seemingly exotic, new concept (timelike entanglement in the field) and converts it into a familiar one (standard entanglement of two detectors at a given time in the future).&#8221;</p>
<p>In their study, the scientists also proposed a thought experiment in which they move a quantum state into the future using timelike entanglement as the resource. They call the process &#8220;teleportation in time.&#8221;</p>
<p>In the thought experiment, the physicists described two qubit detectors, one of which is coupled to the field in the past and one to the field in the future. First, the detector coupled to the past operates on a qubit and generates information about how the qubit can be detected. The qubit is then teleported into the future, essentially skipping over a middle period of time. Then the first detector is removed and the second, future-coupled detector is placed in the first detector&#8217;s spatial location, so that the detectors are separated in time but not in space. After a certain amount of time, the second detector receives the information from the first detector, which it uses to reconstruct the teleported qubit.</p>
<p>The physicists emphasized that there is an important symmetric time correlation that must be followed in order for the procedure to work. If the qubit is teleported at t=0, then the first detector must have operated the same amount of time before t=0 as the second detector operated after t=0. For example, if t=0 is 12:00, and the first detector operated at 11:45, then the second detector must wait to operate at exactly 12:15 in order to achieve entanglement. The scientists also noted that between 12:00 and 12:15, it&#8217;s impossible to recover the teleported qubit.</p>
<p>According to the physicists&#8217; previous work, such timelike entanglement should generate a new thermal effect arising from the quantum vacuum (the quantum vacuum is thought to exhibit several thermal effects, including Hawking radiation from black holes, though none of these thermal effects have been observed). The physicists predict that the new thermal effect may be easier to observe than other thermal effects using current technology. If such a procedure for extracting and converting timelike entanglement can be realized, then it could provide a way for scientists to directly observe the quantum entanglement inherent in the space-time vacuum for the first time.</p>
<p>&#8220;Entanglement is observed every day,&#8221; Olson said. &#8220;However, direct observation of entanglement in the vacuum state would be new, and being able to observe it would potentially enable us to use this entanglement as a resource for quantum technology. Since the vacuum state is the closest thing we have to `nothing&#8217; in physics (it is the state with zero ordinary particles around), observing and using the entanglement inherent in the vacuum as a technological resource would potentially give us a way to build quantum devices with just empty space as the most fundamental ingredient.&#8221;</p>
<p>© 2010 PhysOrg.com</p>
</div>
<p>&#8211;<br />
<img src="http://breakingconvention.co.uk/wp-content/uploads/2011/01/bannersmall.jpg" alt="" width="464" height="132" /></p>
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		<title>Genetically-Engineered Aliens?</title>
		<link>http://www.brainwaving.com/2010/12/22/genetically-engineered-aliens/</link>
		<comments>http://www.brainwaving.com/2010/12/22/genetically-engineered-aliens/#comments</comments>
		<pubDate>Wed, 22 Dec 2010 10:59:19 +0000</pubDate>
		<dc:creator>Brainwaving Admin</dc:creator>
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		<guid isPermaLink="false">http://www.brainwaving.com/?p=1478</guid>
		<description><![CDATA[Mirror-Image Cells Could Transform Science — or Kill Us All Dmitar Sasselov was at the end of a long day of having his mind blown when the really big idea hit him. Sasselov, an astrophysicist and head of the Origins of Life Initiative at Harvard, was sitting in the front row of a packed lecture [...]]]></description>
			<content:encoded><![CDATA[<div>
<h1>Mirror-Image Cells Could Transform Science — or Kill Us All</h1>
<p><img title="Mirror-Image Cells Could Transform Science, or Kill Us All" src="http://www.wired.com/magazine/wp-content/images/18-12/ff_mirrorlife_f.jpg" alt="Photo: Spencer Higgins" width="534" height="257" /></div>
<p><strong><a href="http://www.ted.com/talks/dimitar_sasselov_how_we_found_hundreds_of_potential_earth_like_planets.html">Dmitar Sasselov</a></strong> was at the end of a long day of having his mind blown when the really  big idea hit him. Sasselov, an astrophysicist and head of the Origins of  Life Initiative at Harvard, was sitting in the front row of a packed  lecture hall at the university last spring, listening to the famous  human genome sequencer <a href="http://www.jcvi.org/">J. Craig Venter</a> talk about his efforts to synthesize new forms of life. Sasselov had  introduced the bald, perpetually sunburned biotech entrepreneur at  another lecture that morning, and he’d spent the day squiring Venter  around campus.</p>
<p>By John Bohannon for <a href="http://www.wired.com/" target="_blank">Wired Magazine</a></p>
<p>But Sasselov’s thoughts were light-years away. Two months earlier, a  Delta II rocket had blasted off into the darkness above Cape Canaveral  carrying the Kepler space telescope; Sasselov is on the team using  Kepler to hunt for Earth-like planets around the Cygnus  constellation—looking, ultimately, for extraterrestrial life. And he was  frustrated. Because no matter how much data he and his colleagues  collect—gases in the atmosphere, a fingerprint of color on the  surface—they’ll never actually see aliens themselves. And that makes it  impossible to answer one of the most basic questions of astrobiology:  How diverse is life in the universe? If there is life somewhere other  than here, does it look like earthly life, with DNA and protein? Or  could it run on something else? Venter’s lecture about artisanal  bacteria mapped suddenly onto Sasselov’s frustration. Why not just do  what Venter was doing? If Sasselov wanted to study aliens, why not just  make them himself—or at least the next-best thing? He imagined himself  looking at synthetic aliens on a lab bench, “gazing at the other,” as he  puts it, “similar to us but not the same.” He uncapped his red pen and  scribbled a note: “Arrange a mtg/chat w Jack &amp; GMC,” it read.  “Chiral E. coli w GMC and put it into a vesicle w Jack &amp; subject two  cultures to planetary environments.”</p>
<p>Translation: Go to the synthetic biologists Jack Szostak and George  Church. Ask them to create a life-form that runs on an operating system  different from our own, based on mirror-image versions of earthly  proteins and DNA. Let these alien cells grow and mutate, and see how  they survive. If it worked, those new cells—Church called them “mirror  life”—could answer one of the deepest questions about the origin of  life, not just here on Earth but everywhere in the universe. They might  also open up new avenues of discovery in materials science, fuel  synthesis, and pharmaceutical research. On the down side, though, mirror  life wouldn’t have any predators or diseases to limit its reproduction.  They would have to keep an eye on that.</p>
<p><strong>Four billion years</strong> ago was a hellish time on planet  Earth. It was the end of the aptly named Hadean eon: Volcanoes spewed  lava across rock baked by ultraviolet radiation; asteroids blasted  craters into the landscape. But the worst of the bombardment—including  the colossal impact that knocked loose the chunk that became our  moon—was over. There were oceans of water and plenty of complex organic  chemicals. So in some wet place, maybe near an undersea hydrothermal  vent, maybe in the clay on the shore of a shallow pond, organic  molecules started to replicate. No one knows exactly where or when or  how, but life began.</p>
<p>It was nothing fancy at first. But soon those replicating molecules  clothed themselves in a skin of fat, a membrane to keep their complex  chemistry from diluting away. And with surprising speed, those bubbles  of goop gave rise to a living, functioning cell, the <a href="http://www.actionbioscience.org/newfrontiers/poolepaper.html">Last Universal Common Ancestor</a> of everything alive today—LUCA. Using the genetic differences between  today’s living things as a molecular clock, we can calculate when that  ancestral cell first emerged: about 3.5 billion years ago.</p>
<p>Since then, life has been busy. At last count, there were as many as  100 million species on the planet, and billions more have gone extinct.  And yet, at the most basic level of biochemistry, it has just been more  of the same. Every organism runs on the same operating system that LUCA  invented. Peel back a cell’s membrane and you’ll find a blur of  activity, thousands of chemical reactions taking place all at once. The  conductors of this biochemical ballet are the proteins, nano-size  building blocks and machines that control the speed and timing of every  reaction. From breaking down sugars to clearing waste to repairing the  membrane, the unique shape of each protein determines its job, as  specifically as a lock to its key.</p>
<p>The LUCA operating system was an ingenious solution to keeping track  of all those thousands of proteins. Biochemists call it the central  dogma: Genetic material, in the form of a long nucleic acid polymer  called DNA, stores a digital record of every protein’s design. Another  nucleic acid, RNA, carries the information to a molecular machine called  a ribosome, which reads the RNA and strings together amino acids to  form the protein. Once the string is complete, the protein snaps itself  into the right shape and gets to work.</p>
<p>But there is at least one viable alternative to LUCA: the mirror  image of the entire system. Biochemistry is the story of shapes, and  this is its strange plot twist. Lots of molecules come in multiple  conformations—sticking together the same atoms can sometimes yield  different three-dimensional structures that are the mirror images of  each other, a property called chirality. Indeed, most of the basic  molecules of life—from the nucleic acids of the genome to the amino  acids of the proteins—have mirror-image versions. And all cells have  enzymes called isomerases, which flip certain molecules into their  mirror versions. But for some reason, in the machinery of living things  on Earth, one side of the mirror goes almost wholly unused. All of us  earthlings, from algae to elephants, have proteins made of left-handed  amino acids and a genome of right-handed nucleic acids. (When chemists  say handed, they’re generally referring to the direction that polarized  light skews when beamed through a pure solution of the molecule.) No one  knows why LUCA picked one side of the mirror and not the other.</p>
<p>Theoretically, a cell could be based on “wrong-handed” molecules. Its  biochemistry would work just like ours—DNA to RNA to proteins—but it  would be completely incompatible with earthly life, its chiral twin. And  now, thanks to recent advances in genomics, cell membrane science, and  synthetic biology, an ambitious researcher could go beyond theory and  build it from the ground up. The tools are here (well, almost here) to  make mirror life from scratch.</p>
<div><img class="alignleft" title="Mirror-Image Cells Could Transform Science, or Kill Us All" src="http://www.wired.com/magazine/wp-content/images/18-12/ff_mirrorlife2_f.jpg" alt="Photo: Spencer Higgins" width="315" height="425" />Photo: Spencer Higgins</p>
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<p>Sasselov is the ultimate talent scout for a problem like this. Because of his job at the <a href="http://origins.harvard.edu/">Origins of Life Initiative</a>,  he knew George Church was already trying to build mirror-flipped  molecular machines that could translate genes into proteins, and he knew  that Church didn’t have anything to put them in. The membranes of  earthly cells are built of fat and protein molecules with the wrong  chirality. But Sasselov also knew that if there was anyone in the world  who could create a membrane that would work, it was Jack Szostak.  “They’re both pioneers, but in different ways,” Sasselov says. “They are  my favorite people, and my mentors.”</p>
<p>So he brought them both to a café in Cambridge and made his pitch:  Build a fully functioning mirror cell made of molecules they themselves  would synthesize. Or, to put it another way: Don’t just create new  branches on the tree of life, as Venter was doing with his tweaks of  existing cells. Instead, create an entirely new tree.</p>
<p>Church went for it immediately. He’d been looking at similar ideas  for years. But Szostak didn’t think it would work. “I’m not saying it’s  impossible,” he says, sitting in his office at <a href="http://www.mgh.harvard.edu/">Massachusetts General Hospital</a> a year after that first meeting. “I’m just saying it requires a lot of  hard steps.” Nevertheless, he agreed to support the project.</p>
<p>A soft-spoken 58-year-old Canadian with boyish good looks, Szostak  won the Nobel Prize last year for his work on telomeres, the protective  end caps of chromosomes. He also created the artificial yeast  chromosome, critical to advances in DNA cloning and gene mapping.  Lately, Szostak has been working on the origin of those membranes that  somehow came to enclose and protect LUCA and every cell since. Inside  test tubes in his lab float microscopic, hollow spheres of fat—primitive  membrane bubbles. Given the right molecular ingredients, they  spontaneously self-assemble, grow, and divide, but they’re much simpler  than a naturally occurring cell membrane. The fatty acids have no  chirality; their mirror image is the same molecule. So if they were  injected with, say, the guts of mirror life, there would be no  wrong-handedness to get in the way.</p>
<p>And that’s where Church comes in. He’s 6′5″, with a gnarly beard and a  science fiction fan’s optimism. It’s his job to build the genome and  protein infrastructure for mirror life. But … could mirror cells  actually survive on Earth? “Everything I know from chemistry and physics  says that this should work,” he says. Then he gets a little silly:  “Hey! I know a great shortcut to get our mirror ribosome! I just need a  four-dimensional being to pick me up, rotate me in 4-D, and put me back  as my mirror self.”</p>
<p>Szostak still says he’d bet against their success. The cautious  scientist in him can’t see how the mirror cell, once full of chirally  flipped molecular machinery, will come to life. “Forget about all the  technical issues of making mirror ribosomes, mirror peptides, and mirror  DNA,” he says. “The complexity of reconstituting a normal cell, or even  a simplified cell with 1,000 components, is mind-boggling. You don’t  just mix these things up and get it to work.” Still, he agreed that if  Church got his part figured out, they could use his membranes to keep  everything in. Szostak hopes that even attempting to make mirror life  could lead to a better understanding of how ribosomes work and cells  evolved. He doesn’t mention the possibility that mirror life could earn  someone serious money.</p>
<p><strong>The week that</strong> Sasselov met with Szostak and Church to discuss mirror life, a catastrophe was under way across the <a href="http://www.criver.com/en-US/Pages/home.aspx">Charles River</a> at <a href="http://www.genzyme.com/">Genzyme</a>,  one of the largest biotech companies in the world. Two of its top  sellers—medicines for treating the rare genetic disorders Gaucher’s  disease and Fabry disease—are proteins. In people with these maladies,  fats accumulate in the blood, organs, and brain, causing symptoms from  burning pain to kidney failure—unless they get the drugs, produced by  genetically modified cells suspended in giant nutrient pools called  bioreactors. But that week, a virus that disrupts cell reproduction  infected one of the bioreactors. The entire plant had to be shut down.</p>
<p>It was a hard summer for Genzyme, as well as for the people who rely  on its medications. While the company decontaminated its bioreactors,  thousands of patients around the world rationed their drug supplies.  Genzyme’s stock price dropped 20 percent.</p>
<p>When Church talks about mirror life’s quirky advantages,  invulnerability to this kind of mishap is high on his list. “Viruses  can’t touch a mirror cell,” he says. No virus has evolved to infect it.  And even if a normal virus did figure out how to get past the membrane  of a mirror cell—which usually requires a mechanism that would be  thwarted by wrong-handed molecules—the mirror genome would be unreadable  to the attacker. Viruses work by hijacking their victims’ genomes,  taking over the cellular machinery for making proteins to build more of  themselves; a normal virus wouldn’t have any effect on a mirror cell’s  factory. This makes mirror life a potential workhorse for biotech.</p>
<p>As it happens, the cell that Sasselov ultimately wants to create—a chiral twin of <em>E. coli</em>—couldn’t  make proteins like Genzyme’s cells. It would make the chirally flipped  versions, which would almost certainly be useless.</p>
<p>But that’s not the sort of mirror cell Church has in mind. The  problem, he says, is that billions of years of evolutionary R&amp;D have  made today’s bacterial cells tough, adaptable, and very good at making  more of themselves—but inefficient at spitting out designed-to-order  molecules in a bioreactor. Church wants a “minimal mirror cell” to  produce specific proteins: mirror, normal, and even mixes of the two but  far more efficient than a bioreactor full of finicky, genetically  engineered cells.</p>
<p><a href="http://www.brainwaving.com/wp-content/uploads/2010/12/Mirrorlife.jpg"><img class="alignleft size-full wp-image-1480" title="Mirrorlife" src="http://www.brainwaving.com/wp-content/uploads/2010/12/Mirrorlife.jpg" alt="" width="546" height="445" /></a></p>
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<p>The problem for now is that Church’s entire lab is tuned to the wrong  chiral setting. Every step on the path to making a mirror cell is  blocked by the absence of the right protein tool. The molecule that  makes DNA, called DNA polymerase, isn’t the right shape to string  together wrong-handed nucleic acids. Want to translate those mirror  genes into enzymes? The protein machine that makes RNA copies of  DNA—it’s called RNA polymerase—can’t latch onto mirror DNA. And normal  ribosomes can’t read mirror RNA or string together mirror amino acids.</p>
<p>That’s why Church has been hacking the ribosome, the master tool that  makes all the rest. His plan is to make one that reads regular RNA  transcripts of genes but can string together wrong-handed amino acids to  form mirror proteins. “It would be a bridge between our world and the  mirror world,” Church says. With it, he’d be able to pick a known gene  from a library and build mirror protein tools. Chief among them will be a  full-on mirror ribosome—no easy task, since the ribosome is a mountain  of a molecule, protein and RNA, dating from a time before LUCA. But with  a set of mirror proteins, Church thinks he could build one.</p>
<p>None of this will be easy. Messing with the ribosomes inside a living  cell can kill it, so Church is going to make ribosomes self-assemble  and function in a test tube. And then he’ll have to find mutant versions  that will accept wrong-handed amino acids. Think of it as switching the  sockets on a wrench from standard to metric.</p>
<p>Church and his team have cracked the first step. Though they haven’t  published their results yet, last year his team got a synthetic ribosome  to self-assemble and produce luciferase, the protein that makes  fireflies glow. And he has a library of mutant ribosomes that have the  right kind of sockets—they’ll accept mirror amino acids.</p>
<p>This is where the money comes in. Some of the most valuable drugs are  actually tiny proteins that include wrong-handed amino acids—like the  immunosuppressant cyclosporine. To manufacture it, pharmaceutical  companies have to rely on an inefficient and expensive fungus. A hacked  ribosome modified to handle both normal and mirror amino acids could  crank out the stuff on an industrial scale. And why stop at what we  already know? Being able to produce unnatural proteins cheaply means you  could synthesize billions of them and then test them in parallel for  antitumor and antibiotic properties. Once you got a hit, Szostak says,  you could generate trillions of variations on that molecule, “figure out  which are the good ones, and evolve them.”</p>
<p>Church thinks even bigger. A manufacturing ribosome would be great,  but a fully domesticated mirror cell—able to synthesize more-complicated  stuff—would change everything. “All production will be biological,” he  says. In that science fiction future, vats of virus-proof mirror cells  could pump out biofuel, lay down nano-size organic circuitry, and even  extrude organic cement foundations for skyscrapers.</p>
<p><strong>Of course,</strong> mirror life could also kill us all.  Synthetic biologists like Church have been thinking about doomsday  scenarios for years—the idea that some synthetic super-pathogen will  jump a fence. “But that’s the beauty of mirror life,” Church says. “It  can’t infect us.” Just as viruses from our side of the mirror can’t  infect it, mirror pathogens can’t infect us.</p>
<p>They might be poisonous, though. “I am reluctant to say that the  mirror cells or their contents would be nontoxic,” says Jerry Kasting, a  researcher at the <a href="http://www.uc.edu/">University of Cincinnati</a> who studies the way chemicals interact with human physiology. “But nor  would I expect them to be highly toxic.” It took evolution millions of  years to come up with snake venom proteins that shut down mammal organs.  The same goes for microbes that produce toxins like anthrax and  botulinum. <a href="http://americanhistory.si.edu/kids/molecule/">Mirror molecules</a> aren’t tuned to our biochemistry. That’s why the 1960s controversy over  the antinausea drug thalidomide was such a surprise—the right-handed  version calmed morning sickness in pregnant women, but the left-handed  version caused birth defects. Usually, though, the mirror image of  biological molecules are weaker or have no effect. They can’t shake  hands with our proteins. And that would be one of the safety features of  mirror life. To a mirror cell, Earth’s environment is mostly the  equivalent of Olestra, the synthetic fat that human enzymes can’t break  down. There’s just not enough nutrition for them in the wild.</p>
<p>On the other hand, if mirror cells somehow evolved—or were  engineered—to consume normal fats, sugars, and proteins, we might have a  problem. If a mirror cell got the right set of isomerases to break down  these nutrients, that would be a mess. Mirror cells would slowly  convert edible matter into more of themselves. Anything that ate them  wouldn’t be able to digest the mirrored molecules—they’d pass right  through predators’ guts. And as the mirror cells excreted waste and  died, the accumulating material would be like a self-generating oil  spill with nothing to clean it up.</p>
<p>It gets worse: If mirror cells acquired the ability to  photosynthesize, we’d be screwed. “I suspect that all hell would break  loose,” says <a href="http://en.wikipedia.org/wiki/James_Kasting">Jim Kasting</a>,  a climate scientist at Penn State University and an expert on the  global carbon cycle. (He is also Jerry Kasting’s chiral twin brother;  Jim is right-handed, Jerry is left.) All it would take would be a  droplet of mirror cyanobacteria squirted into the ocean. Cyanobacteria  are at the base of the ocean’s food pyramid, converting sunlight and  carbon dioxide into more of themselves. After doing some rough  calculations on the effects of a mirror cyanobacteria invasion, Jim  Kasting isn’t sure which would kill us first—the global famine or the  ice age. “It would quickly consume all the available nutrients,” he  says. “This would leave fewer or perhaps no nutrients for normal  organisms.” That would wipe out the global ocean ecology and starve a  significant portion of the human population. As the CO<sub>2</sub> in the ocean was incorporated into inedible mirror cells, they would “draw down” CO<sub>2</sub> from the atmosphere, Kasting says. For a decade or two, you would have a  cure for global warming. But Kasting predicts that in about 300 years  the bugs would suck down half of Earth’s atmospheric CO<sub>2</sub>.  Photosynthesis of most land plants would fail. “All agricultural crops  other than corn and sugar cane would die,” he says. (They do  photosynthesis a little differently.) “People might be able to subsist  for a few hundred years, but things would be getting pretty grim much  more quickly than that.” After 600 years, we’d be in the midst of a  global ice age. It would be a total evolutionary reboot—both Kasting and  Church think mirror predators would evolve, but whatever life existed  on Earth by that point wouldn’t include us.</p>
<p>“I would be the first to say that we shouldn’t make a photosynthetic  mirror cell,” Church says. “But I’m reluctant to have a moratorium on  something that doesn’t exist yet.” He says he’d build safeguards into  his mirror cells so they’d perish without constant care. And the  advances in synthetic biology required to transform those first delicate  mirror cells into anything that could survive in the wild are even more  remote.</p>
<p><strong>Early Earth seems</strong> to have been covered in a soup of organic molecules with no <a href="http://home.clara.net/rod.beavon/chiralit.htm">chiral preference</a>.  One plausible theory for where they came from: space. In 1969, a  meteorite fell on Murchison, Australia. The 4.6 billion-year-old rock is  a sample of the solar system from before the birth of our planet. Not  only does it carry both right- and left-handed versions of normal amino  acids; it also contains dozens of exotic amino acids that life ended up  not using at all. This material was pummeling the surface of Earth right  through the Hadean era. But that doesn’t explain why LUCA chose our  side of the mirror.</p>
<p>It could be that the primordial soup wasn’t equally spiced with both  versions of the molecules. Stars sometimes emit polarized light that  selectively breaks apart one version or the other of a chiral molecule.  In fact, the Murchison meteorite contains a slight imbalance between the  right- and left-handed amino acids, with an excess of the kind that got  used by LUCA. (Scientists are convinced that it isn’t due to earthly  contamination.) So it’s possible that the sun destroyed the wrong-handed  amino acids, denying mirror life its construction materials before it  could get a toehold on this planet.</p>
<p>Or the game may be rigged. There might be something more fundamental  about our universe that prefers our side of the mirror. But if so—a  possibility that thrills Sasselov—the physics behind it is unknown. His  new cells will provide the test bed for that hypothesis. “We’ll use the  mirror cells as the basis of the assay,” he says. “We can use them as an  amplifier.” He’ll grow colonies of normal cells and mirror cells under  the same conditions. If the mirror cells aren’t exactly as healthy or  fertile as the normal ones, he’ll know something weird is going on. Even  the tiniest bias in physics will show up as a big difference after  thousands of generations.</p>
<p>Sasselov has another, even stranger experiment planned. If it works,  it will ruin Church’s hopes for virus-free biotechnology but might earn  all three researchers the Nobel Prize. “It’ll be a revolution in our  understanding of life and its place in the cosmos,” Sasselov says. The  short version: He’s going to try to find mirror life that’s already  living on Earth.</p>
<p>In the traditional story of the origin of life, the chances of  evolution producing a living cell are vanishingly small. LUCA was a  lottery winner. But it could just as well be that life is easy—something  that just <em>happens</em> in environments like those of early Earth.  In this version of the story, the primordial soup was a party. There  were plenty of resources, few rules, and all manner of bizarre cellular  characters. LUCA was there—and so was LUCA’s mirror twin. And maybe even  stranger versions of life, too.</p>
<p>We know how the party ended. LUCA went on to become the dominant  colonizer of the planet, evolving into billions of species great and  small, including a midsize naked ape that likes to read magazines. But  what if some of those other partygoers stuck around? Strange life-forms  might be living undetected because we’ve never thought to look for their  chemical traces. They might live in extreme places, at the bottom of  the ocean or inside the pores of rocks—a “shadow biosphere” that’s been  here all along, eking out a quiet living. Just as Sasselov worries that  astronomers have defined the signs of life too narrowly, maybe we don’t  know what to look for right here at home.</p>
<p>If mirror life-forms do exist, Sasselov knows one thing for sure.  “They must have their own viruses,” he says. “That’s just a fact of  life.” And that’s how he’ll trap the shadow biosphere. “We can use  mirror cells as a honeypot,” he says. Earthly mirror viruses might  mistake synthetic mirror cells for their usual prey, come out of hiding  to infect them, and then <em>snap!</em> He’d close the lid of the petri dish. Rather than going hunting for mirror life, Sasselov would coax it into the light.</p>
<p>Kepler has already spotted hundreds of Earth-like planets—Sasselov  estimates that there are 100 million habitable worlds in our galaxy.  Odds are we’ll never visit them. But if Sasselov is right, then the  “aliens” could be here already, and they might be older than LUCA. If  so, mirror life isn’t just here. It’s us.</p>
<p><em>John Bohannon</em> (<a href="mailto:gonzo@aaas.org">gonzo@aaas.org</a>) <em>wrote about a protein-folding game in issue 17.05</em></p>
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		<title>&#8216;Tame&#8217; bears guard Canadian marijuana farm</title>
		<link>http://www.brainwaving.com/2010/08/25/tame-bears-guard-canadian-marijuana-farm/</link>
		<comments>http://www.brainwaving.com/2010/08/25/tame-bears-guard-canadian-marijuana-farm/#comments</comments>
		<pubDate>Wed, 25 Aug 2010 07:28:11 +0000</pubDate>
		<dc:creator>Cosmo</dc:creator>
				<category><![CDATA[Drug Policy]]></category>
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		<guid isPermaLink="false">http://www.brainwaving.com/?p=1440</guid>
		<description><![CDATA[Police raiding a marijuana farm in western Canada were astonished to find black bears apparently guarding it. However initial alarm wore off when officers realised the 10 or so bears did not behave aggressively and were in fact docile and tame. Police believe dog food was used to attract the animals onto the farm in [...]]]></description>
			<content:encoded><![CDATA[<p>Police raiding a marijuana farm in western Canada were astonished to find black bears apparently guarding it.</p>
<p>However initial alarm wore off when officers realised the 10 or so bears did not behave aggressively and were in fact docile and tame.</p>
<p>Police believe dog food was used to attract the animals onto the farm in British Columbia.</p>
<p>But they say the bears may have to be put down if they have become accustomed to living around humans.</p>
<p>Two people were arrested in the raid.</p>
<p>The five police who went to the farm near Christina Lake, close to the US border, to dismantle the marijuana plantation were amazed when the bears loped into view.</p>
<p>&#8220;They were tame, they just sat around watching. At one point one of the bears climbed onto the hood of a police car, sat there for a bit and then jumped off,&#8221; said Royal Canadian Mounted Police sergeant Fred Mansveld.</p>
<p>In Canada, feeding bears is illegal as it leads to bears associating food with humans and increases the likelihood of bears coming into towns and cities to look for food.</p>
<p>Conservation officers are deciding the fate of the bears</p>
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		<title>An answer to the &#8216;Nature vs Nurture&#8217; Debate?</title>
		<link>http://www.brainwaving.com/2010/08/06/an-answer-to-the-nature-vs-nurture-debate/</link>
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		<pubDate>Fri, 06 Aug 2010 12:44:29 +0000</pubDate>
		<dc:creator>Cosmo</dc:creator>
				<category><![CDATA[Evolution]]></category>
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		<description><![CDATA[Savage-Rumbaugh&#8217;s work with bonobo apes, which can understand spoken language and learn tasks by watching, forces the audience to rethink how much of what a species can do is determined by biology &#8212; and how much by cultural exposure.]]></description>
			<content:encoded><![CDATA[<p>Savage-Rumbaugh&#8217;s work with bonobo apes, which can understand spoken language and learn tasks by watching, forces the audience to rethink how much of what a species can do is determined by biology &#8212; and how much by cultural exposure.</p>
<p><object classid="clsid:d27cdb6e-ae6d-11cf-96b8-444553540000" width="446" height="326" codebase="http://download.macromedia.com/pub/shockwave/cabs/flash/swflash.cab#version=6,0,40,0"><param name="allowFullScreen" value="true" /><param name="allowScriptAccess" value="always" /><param name="wmode" value="transparent" /><param name="bgColor" value="#ffffff" /><param name="flashvars" value="vu=http://video.ted.com/talks/dynamic/SusanSavageRumbaugh_2004-medium.flv&amp;su=http://images.ted.com/images/ted/tedindex/embed-posters/SusanSavageRumbaugh-2004.embed_thumbnail.jpg&amp;vw=432&amp;vh=240&amp;ap=0&amp;ti=76&amp;introDuration=15330&amp;adDuration=4000&amp;postAdDuration=830&amp;adKeys=talk=susan_savage_rumbaugh_on_apes_that_write;year=2004;theme=how_we_learn;theme=animals_that_amaze;theme=inspired_by_nature;theme=how_the_mind_works;theme=evolution_s_genius;theme=words_about_words;event=TED2004;&amp;preAdTag=tconf.ted/embed;tile=1;sz=512x288;" /><param name="src" value="http://video.ted.com/assets/player/swf/EmbedPlayer.swf" /><param name="bgcolor" value="#ffffff" /><param name="allowfullscreen" value="true" /><embed type="application/x-shockwave-flash" width="446" height="326" src="http://video.ted.com/assets/player/swf/EmbedPlayer.swf" flashvars="vu=http://video.ted.com/talks/dynamic/SusanSavageRumbaugh_2004-medium.flv&amp;su=http://images.ted.com/images/ted/tedindex/embed-posters/SusanSavageRumbaugh-2004.embed_thumbnail.jpg&amp;vw=432&amp;vh=240&amp;ap=0&amp;ti=76&amp;introDuration=15330&amp;adDuration=4000&amp;postAdDuration=830&amp;adKeys=talk=susan_savage_rumbaugh_on_apes_that_write;year=2004;theme=how_we_learn;theme=animals_that_amaze;theme=inspired_by_nature;theme=how_the_mind_works;theme=evolution_s_genius;theme=words_about_words;event=TED2004;&amp;preAdTag=tconf.ted/embed;tile=1;sz=512x288;" bgcolor="#ffffff" wmode="transparent" allowscriptaccess="always" allowfullscreen="true"></embed></object></p>
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		<title>Monkey Economicus?</title>
		<link>http://www.brainwaving.com/2010/08/04/monkey-economicus/</link>
		<comments>http://www.brainwaving.com/2010/08/04/monkey-economicus/#comments</comments>
		<pubDate>Wed, 04 Aug 2010 10:41:04 +0000</pubDate>
		<dc:creator>Cosmo</dc:creator>
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		<guid isPermaLink="false">http://www.brainwaving.com/?p=1427</guid>
		<description><![CDATA[Laurie Santos looks for the roots of human irrationality by watching the way our primate relatives make decisions. A clever series of experiments in &#8220;monkeynomics&#8221; shows that some of the silly choices we make, monkeys make too. Laurie Santos studies primate psychology and monkeynomics &#8212; testing problems in human psychology on primates, who (not so [...]]]></description>
			<content:encoded><![CDATA[<p>Laurie Santos looks for the roots of human irrationality by watching the way our primate relatives make decisions. A clever series of experiments in &#8220;monkeynomics&#8221; shows that some of the silly choices we make, monkeys make too.</p>
<p><object classid="clsid:d27cdb6e-ae6d-11cf-96b8-444553540000" width="446" height="326" codebase="http://download.macromedia.com/pub/shockwave/cabs/flash/swflash.cab#version=6,0,40,0"><param name="allowFullScreen" value="true" /><param name="allowScriptAccess" value="always" /><param name="wmode" value="transparent" /><param name="bgColor" value="#ffffff" /><param name="flashvars" value="vu=http://video.ted.com/talks/dynamic/LaurieSantos_2010G-medium.flv&amp;su=http://images.ted.com/images/ted/tedindex/embed-posters/LaurieSantos-2010G.embed_thumbnail.jpg&amp;vw=432&amp;vh=240&amp;ap=0&amp;ti=927&amp;introDuration=15330&amp;adDuration=4000&amp;postAdDuration=830&amp;adKeys=talk=laurie_santos;year=2010;theme=not_business_as_usual;theme=a_taste_of_tedglobal_2010;theme=new_on_ted_com;theme=animals_that_amaze;theme=unconventional_explanations;event=TEDGlobal+2010;&amp;preAdTag=tconf.ted/embed;tile=1;sz=512x288;" /><param name="src" value="http://video.ted.com/assets/player/swf/EmbedPlayer.swf" /><param name="bgcolor" value="#ffffff" /><param name="allowfullscreen" value="true" /><embed type="application/x-shockwave-flash" width="446" height="326" src="http://video.ted.com/assets/player/swf/EmbedPlayer.swf" flashvars="vu=http://video.ted.com/talks/dynamic/LaurieSantos_2010G-medium.flv&amp;su=http://images.ted.com/images/ted/tedindex/embed-posters/LaurieSantos-2010G.embed_thumbnail.jpg&amp;vw=432&amp;vh=240&amp;ap=0&amp;ti=927&amp;introDuration=15330&amp;adDuration=4000&amp;postAdDuration=830&amp;adKeys=talk=laurie_santos;year=2010;theme=not_business_as_usual;theme=a_taste_of_tedglobal_2010;theme=new_on_ted_com;theme=animals_that_amaze;theme=unconventional_explanations;event=TEDGlobal+2010;&amp;preAdTag=tconf.ted/embed;tile=1;sz=512x288;" bgcolor="#ffffff" wmode="transparent" allowscriptaccess="always" allowfullscreen="true"></embed></object></p>
<p>Laurie Santos studies primate psychology and monkeynomics &#8212; testing problems in human psychology on primates, who (not so surprisingly) have many of the same predictable irrationalities we do.</p>
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		<title>Did the ingredients for Life come from Space?</title>
		<link>http://www.brainwaving.com/2010/07/28/did-the-ingredients-for-life-came-from-space/</link>
		<comments>http://www.brainwaving.com/2010/07/28/did-the-ingredients-for-life-came-from-space/#comments</comments>
		<pubDate>Wed, 28 Jul 2010 13:16:14 +0000</pubDate>
		<dc:creator>Cosmo</dc:creator>
				<category><![CDATA[Evolution]]></category>
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		<guid isPermaLink="false">http://www.brainwaving.com/?p=1403</guid>
		<description><![CDATA[Ice and organic chemicals found on an asteroid back the theory that asteroids provided the Earth with the bare necessities of life Astronomers have detected a coating of ice and organic chemicals on one of the largest asteroids in the solar system. From the Guardian The space rock, called 24 Themis, is roughly the size [...]]]></description>
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<h2><em> </em></h2>
<h2>Ice and organic chemicals found on an asteroid back the theory that asteroids provided the Earth with the bare necessities of life</h2>
<p>Astronomers have detected a coating of ice and organic chemicals on one of the largest asteroids in the solar system.</p>
<p>From <a href=" http://www.guardian.co.uk/" target="_blank">the Guardian</a></p>
<p>The <a title="More from guardian.co.uk on Space" href="http://www.guardian.co.uk/science/space">space</a> rock, called 24 Themis, is roughly the size of Sicily and orbits the sun in the main belt of asteroids between Mars and Jupiter, more than 300 million kilometres from Earth.</p>
<p><img class="alignleft" src="http://static.guim.co.uk/sys-images/Guardian/Pix/pictures/2010/4/28/1272471993811/Asteroid-24-Themis-007.jpg" alt="Asteroid 24 Themis" width="460" height="276" /><em>Asteroid 24 Themis and two small fragments resulting from an impact more than 1bn years ago. Scientists were surprised to find ice and organic chemicals on the asteroid&#8217;s surface. Artist&#8217;s impression: Gabriel Pérez/Servicio MultiMedia </em></p>
<p>The discovery supports the idea that asteroids may have brought plentiful supplies of water and organic material to Earth in the distant past and so set the stage for the emergence of life.</p>
<p>Two independent groups confirmed the composition of the asteroid&#8217;s surface after observing the 200km-wide rock using <a href="http://irtfweb.ifa.hawaii.edu/">Nasa&#8217;s Infrared Telescope Facility (IRTF)</a> which sits on the summit of Mauna Kea in Hawaii.</p>
<p>Analysis of infrared light glinting off the surface of the asteroid revealed that some wavelengths were being absorbed by water molecules. Further investigation suggested complex organic molecules were also present. The findings are reported in two papers in the journal <a href="http://www.nature.com/nature/journal/v464/n7293/full/4641286a.html">Nature</a>.</p>
<p>&#8220;The organics we detected appear to be complex, long-chained molecules,&#8221; said Josh Emery, a planetary scientist at the University of Tennessee and <a href="http://www.nature.com/nature/journal/v464/n7293/full/nature09028.html">lead author on one of the studies</a>. &#8220;Raining down on a barren Earth in meteorites, these could have given a big kickstart to the development of life.&#8221;</p>
<p>The discovery of frozen water on the asteroid has surprised some scientists because the sun warms the surface enough for ice to melt. One possible explanation is that ice in the core of the asteroid is heated into water vapour, which seeps through pores in the rock and freezes temporarily when it reaches the surface.</p>
<p><a href="http://www.nature.com/nature/journal/v464/n7293/full/nature09029.html">In the second study</a>, a team led by Humberto Campins at the University of Central Florida timed its observations to take account of the asteroid&#8217;s rotation every eight hours and produce a crude map of the surface. It shows that the entire surface of the asteroid is coated with a layer of frost no more than one ten-thousandth of a millimetre thick.</p>
<p><a href="http://www.nature.com/nature/journal/v464/n7293/full/4641286a.html">In an accompanying article</a>, Henry Hsieh, a planetary scientist at Queens University in Belfast, likened the ice to a &#8220;living fossil&#8221;: a remnant of the solar system that many considered long gone.</p>
<p>&#8220;This is a thin layer of ice. It&#8217;s not like going outside on a snowy day,&#8221; he told the Guardian. &#8220;But we didn&#8217;t really think water would survive in the asteroid belt, and certainly not on the surface of an asteroid.&#8221;</p>
<p>The discovery is intriguing because it may finally explain how two thirds of the Earth came to be submerged in water, turning a parched rock into a haven for life.</p>
<p>The Earth formed close to the sun as a dry boulder 4.5bn years ago, but asteroids from cooler regions of space would have slammed into the surface for millennia, releasing any water they contained on impact. At the time, asteroids were more numerous and may have carried far more water than has been found on 24 Themis.</p>
<p>Some scientists believe asteroids may have delivered water to every planet in the solar system, but Earth&#8217;s rocky surface, size and orbit ensured water condensed and remained on the ground, ultimately forming vast seas and oceans.</p>
<p>&#8220;Each asteroid might not have carried a lot of water, but if you strike a planet with a few thousand or million of them, it would gradually build up,&#8221; Hsieh said.</p>
<p>The finding of frozen water as far out as the main asteroid belt suggests water might also be spread throughout alien solar systems. &#8220;The building blocks of life – water and organics – may be more common near each star&#8217;s habitable zone,&#8221; said Emery. &#8220;The coming years will be truly exciting as astronomers search to discover whether these building blocks of life have worked their magic there as well.&#8221;</p>
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		<title>Genetically Modified Animals</title>
		<link>http://www.brainwaving.com/2010/07/28/genetically-modified-animals/</link>
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		<pubDate>Wed, 28 Jul 2010 11:16:24 +0000</pubDate>
		<dc:creator>Joe Murray</dc:creator>
				<category><![CDATA[Science & Technology]]></category>
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		<guid isPermaLink="false">http://www.brainwaving.com/?p=1397</guid>
		<description><![CDATA[UNLESS you live in Europe, your last meal probably contained genetically modified ingredients &#8211; 80 per cent of soya grown worldwide is now genetically engineered, for instance. Yet while modified plants are rapidly taking over the planet&#8217;s farms, the same cannot be said for GM animals. There&#8217;s the occasional flurry of reports about glowing rabbits [...]]]></description>
			<content:encoded><![CDATA[<p>UNLESS you live in Europe, your last meal probably contained genetically modified ingredients &#8211; 80 per cent of soya grown worldwide is now genetically engineered, for instance. Yet while modified plants are rapidly taking over the planet&#8217;s farms, the same cannot be said for GM animals. There&#8217;s the occasional flurry of reports about glowing rabbits or marmosets, but no one is yet eating beef from bioengineered bullocks.</p>
<p>From the <a href="http://www.newscientist.com/" target="_blank">NewScientist</a> by Bob Holmes</p>
<p>The main reason is that the genetic engineering of animals &#8211; with the exception of mice &#8211; has been a slow, tedious process needing a lot of money and not a little luck. Behind the scenes, though, a quiet revolution has been taking place. Thanks to a set of new tricks and tools, modifying animals is becoming a lot easier and more precise. That is not only going to transform research, it could also transform the meat and eggs you eat and the milk you drink.</p>
<p>The first transgenic animals were produced by injecting DNA into eggs, implanting the eggs in animals and then waiting weeks or months to see if any offspring had incorporated the extra DNA. Often fewer than 1 in 100 had, making this a long, expensive process. &#8220;That&#8217;s just really inefficient,&#8221; says Scott Fahrenkrug, a geneticist at the University of Minnesota in St Paul.</p>
<p>In mice, geneticists found a way round this problem: producing cells with the desired modification first, before growing entire animals. The researchers alter the DNA in embryonic stem cells growing in a dish, then inject successfully modified cells into embryos. This yields <a href="http://www.newscientist.com/article/mg18024215.100-the-stranger-within.html">chimeras</a> with a mixture of cells that can be bred to produce mice in which all the cells are modified. It has become cheap and easy: there are now many millions of GM mice in labs worldwide, including extraordinary creations like the &#8220;supermouse&#8221; capable of running twice as far as normal, &#8220;brainbow&#8221; mice whose neurons light up in different colours and even mice that do not fear cats.</p>
<h3>Saved by the clones</h3>
<p>It is not yet possible to grow embryonic stem cells from other animals &#8211; except, since last year, rats &#8211; so this technique does not work for other species. However, improvements in cloning mean that for many species ordinary cells can be altered, and entire animals then produced by cloning cells with the desired modification.</p>
<p>At the same time, biologists have developed more efficient ways of adding DNA to cells, by hijacking natural genetic engineers such as viruses, and jumping genes capable of &#8220;copying and pasting&#8221; themselves. All these advances mean the effort and cost needed to produce GM animals has decreased a hundredfold, says Fahrenkrug.</p>
<p>Researchers are also developing <a href="http://www.newscientist.com/article/mg19025551.100-genetic-tools-you-can-trust.html">far more precise ways of altering DNA</a>, rather than relying on random insertion. One promising new tool is the zinc finger nuclease: a DNA-cutting enzyme attached to a &#8220;zinc finger&#8221; that can be customised to bind to specific DNA sequences. Zinc finger nucleases allow engineers to cut a cell&#8217;s DNA at a preselected spot. When the cell attempts to mend the cut, it often leaves out a few DNA letters or incorporates a few extra ones, so this method can be used to destroy, or knock out, specific genes.</p>
<p>&#8220;This will revolutionise genetic engineering of animals,&#8221; says Bruce Whitelaw, a geneticist at the Roslin Institute in Edinburgh, UK. &#8220;You can design your zinc finger to cut at a specific site in the genome, and it doesn&#8217;t matter what that genome is. It could be pig, sheep, dog, rat &#8211; it doesn&#8217;t matter.&#8221;</p>
<p>What&#8217;s more, in theory, if you also add a bit of DNA flanked by sequences matching those on either side of the cut, the cell should sometimes be tricked into repairing the cut by splicing in the added DNA &#8211; a process known as homologous repair. In other words, the extra DNA is added exactly where you want it. Rumour has it that researchers at the biotech company Sigma-Aldrich are the first to use zinc fingers to achieve this in animals.</p>
<p>The ability to easily and precisely modify animals will undoubtedly lead to huge pay-offs in research and medicine. Whether it will transform the animal products we consume is less clear.</p>
<p>The US Food and Drug Administration, which regulates GM animals, has yet to approve one for agricultural use. The first candidate, a fast-growing salmon, has been under review for more than a decade, in part because of fears it could affect wild populations. Such concerns would not apply to most farm animals or pets, and last year, the FDA appeared to be preparing the ground for commercial production of GM animals when it published guidance on the steps a company would have to take to obtain FDA approval. The European Union is working on a similar statement, but this is not expected to be finalised until 2012.</p>
<p>Ultimately, the adoption of GM farm animals may hinge on public opinion and the demand for the benefits they can offer. That demand may be felt most urgently in countries such as China, where meat consumption is skyrocketing. &#8220;I anticipate that genetically engineered livestock will be first used in China, Cuba and other places around the world, and then come to the US and Europe,&#8221; says James Murray, an animal geneticist at the University of California, Davis. &#8220;It&#8217;ll be the reverse of what you saw with the plants.&#8221;</p>
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<div>GM livestock will first be used in China and Cuba, and then come to the US and Europe</div>
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<p>So in 20 years&#8217; time will GM animals be as widespread as their botanic counterparts are now? &#8220;Technologically, nothing is standing in our way,&#8221; says Fahrenkrug. &#8220;Really, the issue is coming down to: what are you going to make?&#8221; Some of the likeliest future developments are presented below.</p>
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<div>Technologically, nothing is standing in our way. The issue is, what are you going to make?</div>
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<h3>Tasty meat, milk or eggs</h3>
<p>Don&#8217;t expect a cow to walk up to your restaurant table and offer you a prime cut anytime soon. Nonetheless, genetically modified farm animals could provide us with more nutritious meat, milk and eggs, while causing fewer pollution problems and perhaps suffering less too.</p>
<p>Pigs whose muscles are enriched with <a href="http://www.newscientist.com/article/mg20627601.400-omega3-fishy-claims-for-fish-oil.html">omega-3s</a> have <a href="http://www.newscientist.com/article/dn8900-transgenic-pigs-are-rich-in-healthy-fats.html">already been created</a>, and researchers are exploring similar options with milk. Meanwhile, a team at the University of Guelph in Ontario, Canada, has developed a pig that contains a gene for a bacterial enzyme that enables them to absorb more phosphorus from their feed. These &#8220;Enviropigs&#8221; excrete less than half as much phosphorus as ordinary pigs, thus reducing the pollution problem from intensively reared animals. The pigs have not yet been approved for human consumption, but China has begun importing them for testing. &#8220;They&#8217;re obviously very interested &#8211; they consume half of the world&#8217;s pork,&#8221; says Scott Fahrenkrug of the University of Minnesota. A similar effort under way in fish could reduce pollution from fish farms.</p>
<p>Animals could also be modified to reduce disease risk. Hematech of Sioux Falls, South Dakota, has created a cow that can&#8217;t get BSE because it lacks the protein that turns rogue and triggers mad cow disease. Other ideas being tried or considered include making pigs and chickens less susceptible to influenza, and chicken eggs that produce human antibodies to rotavirus, protecting people who eat the eggs against this common gastrointestinal pathogen.</p>
<p>Welfare could be improved, too. <a href="http://dx.doi.org/10.1038/nbt1078" target="nsarticle">Cows have been modified</a> to produce a compound that protects them against udder infections, for example. Engineering could also end the quick slaughter of half of all offspring of dairy cattle and laying hens, whose owners have little use for male animals. This could perhaps be done by inserting genes on a bull&#8217;s Y chromosome to cripple male-producing sperm. &#8220;The idea has been around for 15 years, but now the efficiency of making transgenics is so high that this problem will be solved within the next couple of years,&#8221; says Fahrenkrug, whose group is one of about 10 worldwide working on the issue.</p>
<h3>Pets in all colours</h3>
<p>The first genetically modified pet to go on sale was a medaka, or rice fish, with a green fluorescent jellyfish gene, launched in Taiwan in 2003. The <a href="http://www.azoo.com.tw/azoo_en/azoohtml/tk1video.php" target="nsarticle">&#8220;Night Pearl&#8221;</a>, or <a href="http://www.azoo.com.tw/azoo_en/modules.php?op=modload&amp;name=fish_Review&amp;file=index&amp;req=view_cat&amp;cid=13" target="nsarticle">TK-1</a>, is sterilised before sale.</p>
<p>It was swiftly followed by the <a href="http://www.glofish.com/" target="nsarticle">GloFish</a>, a <a href="http://www.newscientist.com/article/mg18024263.000-they-came-they-glowed.html">zebrafish with fluorescent genes</a> from jellyfish or corals that has become a popular aquarium fish in the US and parts of Asia, with green, red and yellow versions available and more on the way. Like the medaka, it was a spin-off from scientific research. It is not approved in Australia, Canada, California or Europe, though there have been illegal imports. If released into the wild, it would only have a chance of surviving in tropical regions.</p>
<p>Several years ago, there was talk of genetically engineering <a href="http://www.newscientist.com/article/mg17122991.200-mans-even-better-friend.html">cats and dogs that people would not be allergic to</a>. <a href="http://www.the-scientist.com/blog/display/56191/" target="nsarticle">That never happened</a>, but new methods would make knocking out <a href="http://www.newscientist.com/article/dn6594-more-doubts-over-plan-for-allergenfree-cats.html">the relevant genes</a> much easier if attempted today.</p>
<p>While there are valid reasons to be concerned about the welfare of GM pets, conventional breeding can also produce deformities, as seen in many dog breeds.</p>
<h3>Pharming drugs</h3>
<p>Genetic engineering is now a standard technique in the production of many protein-based drugs. Human insulin, for example, has long been produced by cultures of bacteria carrying the human insulin gene. Pharmaceutical companies are eager to turn animals into drug factories, too. That&#8217;s because animal cells alter many of their proteins by tacking on sugars and other &#8220;decorations&#8221;, an extra step that bacteria cannot perform. As a result, many proteins &#8211; most importantly, antibodies &#8211; work much better if they are made in animal cells.</p>
<p>One such animal-produced protein has already been approved for clinical use by the US Food and Drug Administration. An anticoagulant called antithrombin III is purified from the milk of genetically engineered goats created by GTC Biotherapeutics, a biotech company in Framingham, Massachusetts.</p>
<p>Many others are under development. The Dutch company Pharming has <a href="http://www.pharming.com/index.php?act=prod" target="nsarticle">several products in the pipeline</a>, including <a href="http://www.newscientist.com/article/mg19926641.700-making-formula-milk-more-like-mums.html">human lactoferrin</a> produced in cow&#8217;s milk. This antimicrobial compound could be <a href="http://www.newscientist.com/blog/shortsharpscience/2007/03/human-genes-in-my-food-yes-please.html" target="nsarticle">added to foods</a> such as yoghurt. Open Monoclonal Technology of Palo Alto, California, has engineered rats to produce human antibodies. Its first product, an anti-cancer antibody for treating lymphoma, should be in clinical trials within two to three years. And Hematech of Sioux Falls, South Dakota, has produced cattle that it plans to use to make human antibodies to potential bioweapons such as anthrax and smallpox.</p>
<h3>Understanding genes</h3>
<p>We have around 23,500 genes. What do they all do, and which gene variants contribute to common diseases? By disabling genes to see what happens, geneticists can work out what they do. Until recently, however, this was possible only in mice, which are not always the best animals to use. Now genes can be &#8220;knocked out&#8221; in an ever-growing range of animals.</p>
<p>At the Medical College of Wisconsin, Howard Jacob has used zinc finger nucleases to knock out 43 genes in rats associated with increased risk of high blood pressure or kidney disease. Once, knocking out even a single gene in rats would have been enough to earn someone a doctorate. &#8220;I&#8217;ve now done 43 PhD&#8217;s work in nine months,&#8221; says Jacob. He is now raising the resulting animals to see to what extent each gene contributes to disease risk.</p>
<h3>Tacking diseases</h3>
<p>The new techniques are being used to create animals that are a big improvement on the mouse &#8220;models&#8221; used to study human diseases today. &#8220;Not only is this low-hanging fruit, it is easier politically to deal with,&#8221; says Scott Fahrenkrug at the University of Minnesota. &#8220;Most people are OK with this kind of work. The bigger issues are the agricultural ones.&#8221;</p>
<p>For instance, Randall Prather&#8217;s team at the University of Missouri in Columbia has disabled the <em>CFTR</em> gene in pigs, which causes them to develop symptoms of cystic fibrosis. Using these pigs, the researchers have shown that the lung inflammation characteristic of the disease in humans develops as a result of bacterial infection (<a href="http://dx.doi.org/10.1126/scitranslmed.3000928" target="nsarticle"><em>Science Translational Medicine</em>, vol 2, p 29ra31</a>). Earlier mouse models of cystic fibrosis had been unable to resolve this question, because mice lacking the <em>CFTR</em> gene do not develop lung disease.</p>
<p>Fahrenkrug&#8217;s team have created pigs with high cholesterol by deleting a protein that mops up LDL cholesterol. Since the heart and arteries of pigs are roughly the same size as those of humans, the modified pigs are a realistic testbed for stents and other devices to keep blocked arteries open.</p>
<h3>Xenotransplants</h3>
<p>Many people die waiting for organ transplants. Animals could provide an unlimited supply, if only the human immune system did not reject them. So geneticists have been working for years to create pigs whose organs lack the molecules that trigger rejection, <a href="http://dx.doi.org/10.1111/j.1399-3089.2010.00573_8.x" target="nsarticle">such as alpha 1,3-galactosyltransferase</a>. The race is gathering momentum.</p>
<p>Already, a team led by Heiner Niemann at the Institute of Farm Animal Genetics in Mariensee, Germany, has begun testing pig organs modified to be compatible with monkey immune systems. The aim is to get monkeys to survive for 180 days after the transplant &#8211; a milestone that would mean they could begin considering trials in humans. So far, however, they have fallen short of that goal. &#8220;Occasionally you get the 180 days, but not on a regular basis,&#8221; says Niemann.</p>
<p>Meanwhile, Scott Fahrenkrug of the University of Minnesota and his colleagues are working on another major barrier to pig-to-human transplantation: the presence of dormant viruses within the pig genome that could, in theory, reawaken and infect a human recipient. Fahrenkrug has added a gene for a human antiviral protein into pigs in the hope that it will suppress the viruses. If it works, the likely first application will be transplants of insulin-producing islet cells from pigs to humans. &#8220;This is personal issue for me,&#8221; says Fahrenkrug. &#8220;I have friend and family members that have died from the complications of diabetes.&#8221;</p>
<p><em>Bob Holmes is a consultant for <em>New Scientist</em> based in Edmonton, Canada<br />
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